Databases

This is a partial and continually evolving list.

  • AAindex: repository of physicochemical and biochemical properties of amino acids.
  • BindingDB: repository of binding affinities for protein-drug interactions.
  • CATH: structural classification of proteins.
  • D2P2: repository of putative annotations of intrinsic disorder in proteins.
  • DisProt: repository of native annotations of intrinsic disorder in proteins.
  • DrugBank: repository of drugs and drug targets.
  • ELM: repository of functional sites in proteins.
  • InterPro: classification and prediction of protein domains and functions.
  • KEGG: Kyoto encyclopedia of genes and genomes.
  • mentha: repository of curated protein-protein interactions.
  • MobiDB: repository of intrinsic disorder and mobility in protein.
  • PDB (Protein Data Bank): repository of secondary and tertiary protein structures.
  • PDID: repository of protein-drug interaction in structural human proteome.
  • PISCES: server for culling of protein sequences.
  • PROSITE: repository of protein domains, families and functional sites.
  • RefSeq: repository of non-redundant set of reference protein sequences.
  • SCOPe: structural classification of proteins.
  • UniProt: repository of protein sequences and their functional annotations.