Biomine Kurgan Lab

College of Engineering

Webservers and Databases

Databases

  • New DescribePROT (database of amino acid-level structure and function predictions)
  • PDID (database of protein-drug interaction in the structural human proteome)

Recently released webservers

  • New flDPnn2 (CAID2-winning prediction of disorder and disorder functions)
  • New hybridDBRpred (prediction of disordered and structured DNA-binding residues)
  • New CoMemMoRFPred (prediction of lipid-binding MoRF regions)
  • New DEPICTER2 (intrinsic disorder and disorder function prediction server)
  • New DeepPRObind (prediction of disordered and structured protein-binding residues)
  • New qNABpredict (fast prediction of protein-level content of nucleic acids-binding residues)
  • New hybridRNAbind (prediction of disordered and structured RNA-binding residues)

All other webservers (listed alphabetically)

  • CONNECTOR (prediction of protein-drug interactions)
  • CRYSTALP2 (crystallization propensity prediction)
  • CyPred (high-throughput prediction of cyclic proteins)
  • DEPICTER (intrinsic disorder and disorder function prediction server)
  • DFLpred (prediction of disordered flexible linker)
  • DisCon (disorder content prediction)
  • disCoP (prediction of disordered residues)
  • DisoLipPred (prediction of disordered lipid binding regions
  • DisoRDPbind (prediction of disordered RNA, DNA and protein binding residues)
  • DISOselect (disorder predictor recommendation at the protein level)
  • DMRpred (prediction of disordered moonlighting regions)
  • DNAgenie (prediction of residues that bind A-DNA, B-DNA and single stranded DNA)
  • DRNApred (prediction of RNA and DNA binding residues)
  • fDETECT (prediction of protein production, purification, and crystallization)
  • flDPnn (CAID1-winning prediction of disorder and disorder functions)
  • fMoRFpred (high-throughput prediction of short disorder-to-order transitioning binding regions)
  • funDNApred (FCM-based prediction of DNA binding residues)
  • hybridPBRpred (prediction of protein binding residues)
  • hybridNAP (prediction of DNA-, RNA- and protein-binding residues)
  • hybridPBRpred (prediction of protein binding residues)
  • ILbind (prediction of ligand-binding proteins)
  • MFDp (prediction of disordered residues)
  • MFDp2 (prediction of disordered residues)
  • MoRFpred (prediction of short disorder-to-order transitioning binding regions)
  • NsitePred (prediction of nucleotide-binding residues)
  • PPCpred (crystallization, purification, and production propensity prediction)
  • PROBselect (prediction of protein binding residues)
  • QUARTER (quality assessment for prediction of intrinsic disorder)
  • QUARTERplus (quality assessment for prediction of intrinsic disorder)
  • RAPID (high-throughput prediction of disorder content)
  • SCRIBER (prediction of protein binding residues)
  • SLIDER (high-throughput prediction of proteins with long disordered segments)
  • SSCon (prediction of secondary structure)
  • XRRPred (prediction of protein crystal quality quantified with resolution and R-free)

Decomissioned webservers

  • 1D server (integrated server for prediction of fold, structural class and secondary structure content)
  • MODAS (structural class prediction)
  • PFRES (fold prediction)
  • PSSC-core (secondary structure content prediction)
  • SCEC (structural class prediction)