DescribePROT-DatabasE of StruCtuRe and functIon residue-Based prEdictions of PROTeins

DescribePROT webserver

This server provides 13 putative structural and functional properties at the amino acid level for 1,365,946 proteins from 83 complete proteomes of popular/model organisms. Help and Tutorial that explain how to use DescribePROT are available HERE.

Statistics

Number of proteins 1,365,946
Number of amino acids 599,515,263
Number of predictions 7,793,698,419
Number of predicted properties 13
Number of predictors 10
Number of proteomes 83
Number of eukaryotic proteomes 56
Number of prokaryotic and viral proteomes 27

Search database

Provide one of the two inputs listed below

Enter an UniProt accession number or UniProt entry name for a query protein.

Enter a FASTA formated sequence for a query protein.

Download database

Download the database from HERE .

References

Upon the usage the users are requested to use the following citation:

  • Bi Zhao, Akila Katuwawala, Christopher J. Oldfield, A. Keith Dunker, Eshel Faraggi, Jörg Gsponer, Andrzej Kloczkowski, Nawar Malhis, Milot Mirdita, Zoran Obradovic, Johannes Söding, Martin Steinegger, Yaoqi Zhou, and Lukasz Kurgan. DescribePROT: Database of amino acid-level protein structure and function predictions. (submitted)

Acknowledgments

We acknowledge with thanks the following software used as a part of this server.
Users should cite the corresponding article(s) upon the use of predictions generated by the selected predictor(s).